I'm working on a custom Laboratory Information Management System (LIMS) for my lab. We have a hyper specialized image capture and processing pipeline so I wanted to develop a system that's molded to that. It's mostly MATLAB, but I've sprinkled in a little Python for metadata extraction purposes.
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Sounds interesting.
Have you seen Pyp? Might be relevant, since it is about image processing, pipelines and Python.
I've not heard of Pyp but it looks interesting. I don't immediately see how it would integrate with this project but I'll put this in my back pocket. My project uses a python environment in MATLAB to import "nd2", a python package that wraps the Nikon ND2 SDK. It's extremely useful for extracting metadata about the microscope configuration the experiment used.