I don't like showing the scatterplots in these examples, as "correlation" I think is more associated with the correlation coefficient than the more generic independence that the author means in this scenario. E.g. a U shape in the scatterplot may have a zero correlation coefficient but is not conditionally independent.
> NB: Correlated does not mean linearly correlated
> For simplicity, I have used linear correlations in all the example R code. In real life, however, the pattern of correlation/association/mutual information we should expect depends entirely on the functional form of the causal relationships involved.
Fine, but...
> And if you are not familiar with what everyone else means by correlation, you're very unlikely to be an expert.
Perhaps, but this is not relevant. If there's a problem with this work, then that problem can be criticized directly. There is no need, and it is not useful, to infer "expertise" by indirect means.
there are various schemes for estimating mutual information from samples. if you do that and mutual information is very close to zero, then I guess you can claim the two rvs are independent. But these estimators are pretty noisy and also often computationally frustrating (the ones I'm familiar with require doing a bunch of nearest-neighbor search between all the points).
I agree with the OP that it's better to say "non-independence" and avoid confusion, at the same time, I disagree that linear correlation is actually the standard definition. In many fields, especially those where nobody ever expects linear relationships, it is not and everybody uses "correlated" to mean "not independent".
Ok this is correct, but has nothing to do with causality. Whether or not two variables are correlated and whether or not they are independent, and when one does or doesn't imply the other, is a conversation that can be had without resorting to the concept of causality at all. And in fact that's how the subject is taught at an introductory level basically 100% of the times.
It does. Dependence and independence have a lot to do with causation, as the article explains.
> Whether or not two variables are correlated and whether or not they are independent, and when one does or doesn't imply the other, is a conversation that can be had without resorting to the concept of causality at all.
Yes, but this is irrelevant. It's like saying "whether or not someone is married is a conversation that can be had without resorting to the concept of a bachelor at all".
You can talk about (in)dependence without talking about causation, but you can't talk in detail about causation without talking about (in)dependence.