That was almost certainly the Intel Avoton clock degradation issue. It hit Cisco and lots of other networking vendors too. I lost Supermicro and ASRock boards to the same thing. Soldering on the resistor gets the CLK circuit back into spec for a while, but I had an officially-repaired board eventually fail again in the same way after a few more years since it keeps degrading.
https://news.ycombinator.com/item?id=13585048
https://www.auvik.com/franklyit/blog/vendors-clock-signal-fl...